CDS

Accession Number TCMCG021C38728
gbkey CDS
Protein Id XP_029119768.1
Location join(27628001..27628033,27628174..27628242,27628332..27628664,27628774..27628977,27630152..27630228,27630413..27630482,27633459..27633511,27633867..27633924,27634010..27634395,27634511..27634583,27635293..27635391,27635469..27635537,27635629..27635706,27635880..27635966,27636048..27636082,27636269..27636374,27637475..27637555,27637648..27637740,27637822..27637875,27637958..27638074,27638172..27638270,27642937..27642984,27643075..27643167,27644710..27644817,27644948..27645012,27645096..27645198,27647721..27648041,27648152..27648286)
Gene LOC105042956
GeneID 105042956
Organism Elaeis guineensis

Protein

Length 1048aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268357
db_source XM_029263935.1
Definition pre-mRNA-processing protein 40A isoform X1 [Elaeis guineensis]

EGGNOG-MAPPER Annotation

COG_category A
Description Domain with 2 conserved Trp (W) residues
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12821        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005685        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008360        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016477        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048870        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051674        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070064        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCAGCAATCCACAGTCTTCTGGGGCACAGCCCCTTAGGCCTGCAGTGGTGGGCTCCACAGGTCCACCTCAAAATTTTGGTCCACCAATGTCTATGCAGTTCAGACCTGTGGTTCCGGCTCAGCAAACACATCAGTTCATCCCAGCCGCTTCTCAGCAATTCCGACCTGTTGGGCAGGGTGTTCCTGGTTCAAATATTGGAATACCTTCTGGTCAAACTCAAATGCACCATTTTCCTCAAGCTGCACAGCATTTGCCTCCAAGATCAGGTCCACCAGCACCACCTTCTTCACAAGCAATTCCAATGCCATATGTTCAGCCAAGTAGGCCTATGACATCTGGGTCATTGCAGCCCCAGCAAAATCCTCAGATGCCAAACACTCATCTGCCTAATTTAGGTGGCATAGGAATGCCTCTTTCTTCATCTTATACGTTTGCAACGTCCTATGGCCAGCCACCAAATACTGTTAATACACCATCCCAGTATCAACCAGCATCCCAGATGCAACCACCCATTACACCTGCAGTGGGACAACCATGGTCTGCACCTGGGACTCAGAATGTACCTCTTGTTACACCTCTGGTTCAGGCTGCACCACAATCTTCAGCTACGGGGGCTGCGGGGGGCACACTTGCTACAACAAATGCACAACCTAGGTCTTCTGAACAGACCTCTTCTGATTGGCAAGAGCACACATCTGCTGATGGAAAAAGATATTATTACAATAAGAAGACTAGACAATCTAGCTGGGAGAAGCCCTTTGAGTTGATGACACCTATTGAGAGGGCTGATGCCTCGACTGATTGGAAGGAGTTCAGCACTTCGGATGGACGAACATACTATTATAACAAGGTCACAAAGATATCAAAATGGATAATTCCTGATGAGCTCAAGTTAGCTCGTGAGCAAGCATTAAGGGCTGCAGCGCAGCAGGCACATACAGAAACTGGAACAGCTTCTGTTGCCCCAGTTGCTCCAACTGTTTCTTCTGGGGAGATCCCTTCCACCACAACAACCTCTGTGATTCCTGGAACAACATCTGCAGTAGCGTCAAGCTTTGTTCCAGTGGCAGTCAACTCAGTTATATCATCATCTGCGATGGCTTCGGTATCACCATCCGTTATACCATCACCCGGAATCTTGTCGAGTTCCTCCTTGGGAATTCCAAGCACAGTTGGCTCATCAAATCTTCAGACAACCATAACGCCATTACCCGCACCTATTTCTGCTAACACGGTGGTGTCTACTGTTGCAACAGAATCTGCATCATCTAACACTAAGAGTAATCATGACAGTTCATCTCTCCTAAATACTGCAAGTGTGCCTGATGGTGCTTCTGCTCAGGATTTGGAGGAAGCTAAAAAGGCTATGCCAGTTACTGGAAAAGTCAATGTCACTCCAATGGAGGAGAAAACAATTGATGAAGAACCTTTGGTTTATTCTAATAAGCAGGAGGCAAAAGCTGCATTCAAAGCCCTACTGGAATCTGCAAATGTTGAATCTGATTGGACTTGGGAGCAGGCAATGAGAGTTATTATTAATGACAAGAGATATGGTGCATTAAAGACGCTTGGTGAGAGGAAACAAGCATTTAATGAGTACTTGGGACAAAGGAAAAAACAGGAAGCTGAGGAAAGGCGCATTAAACAAAAGAAAGCACGGGAAGACTTCACCAGAATGTTGGAGGAATGCAAAGAATTAACTTCGTCAACCCGGTGGAGTAAAGCTGGGACCATGTTTGAGAATGATGAACGGTTTCATGCTGTTGAGCGGCCAAGAGATCGTGAGGATCTATTTGAAAGCTATTTGGTGGATCTCCAGAAAAAGGAAAGAGCAAAGGCTGCTGAGGAGCATAAGCGAAACATAATGGAGTATAGAGCTTTTCTTGAATCATGTGACTTTATCAAGGCAAACACCCAATGGAGGAAAGTTCAAGATCGACTGGAGGATGATGAAAGATGTTCTCGACTTGAAAAAATTGATCGTTTGGAGATCTTCCAGGAGTATATACATGATCTGGAGAAGGAAGAGGAGGAGCAGCGGAAGATACAGAAGGAGCAATTAAGACGGCAGGAACGCAAAAACCGTGATGAGTTTCGCAAATTAATGGAAGAACATGTTGCTGCTGGAATTCTTACAGCTAAAACTCACTGGCGTGATTACTGTATGCAGGTGAAGGATTTGCCTTCTTACATAGCAGTATCATCAAACACATCCGGTTCAACACCAAAAGATCTGTTTGAGGATGTTGCAGAGGAACTCGAAAAGCAGTACCATGAGGACAAGGCCCAGATCAAAGAAGCAATTAAGATCCGAAAGATTGCTTTGGCATCTTCATGGACATTTGAAGATTTCAAGGCTGCCACTTTGGGTGATGATAGCCTAAAAGGAATTTCTGAGACAAACATGAAGCTTGTTTTTGATGAGTTACTGGAAAGGCTTAGGGAGAAAGAGGAGAAGGAGGCTAAGAAGCGCCAACGTCTTGCAGATAATTTCTCTGACCTGCTTTACTCAATTAAGGAAATAACTGCTTCATCTAGATGGGAGGACTGCAAGTCACTGTTTGAAGACAGCCAAGAGTACAGGTCAATTGGTGATGAGAATGTTGTAAGAGAGATTTTTGAAGAACATGTAACCCGCTTGCAAGAAAAGCTGAAAGAGAAAGAGCGTAAAAGAGAAGAGGAAAAGGCAAAGAAAGAGAAAGAAAGAGAGGAGAAAGAGAAGAGGAAGGAGAAAGAAAGGAAAGAAAAGGAAGAAAGGAAGGAAAAAGAGAGAGAACGCGAAAAAGACAAAGGGAAGGACCGATCTAGAAAGGATGAAGCAGAAAGTGAAAATGTTGATGTGATGGACAGCCATGGCTCGAAGGATAGAAAGAGGGAAAGGGATAAGGAAAGAAAGCATCGGAAACGTCACCACAGCATGGCTGATGATGTAAGCTCTGAAAAAGATGATAAAGAGGAGTCCAAGAAGTCCCGCAGGCATAGCAGTGACCGGAAAAAATCACGTAAGCATGCTTACACTACCGATTCAGATAGTGAAAATCGACACAAGAGGCATAAGAAAGATCGAGATGGGTCCCGTAGAAATGGTGGTTATGAAGAGCTTGAGGATGGGGAACTTGGAGAGGATGGGGAAATACGTTAG
Protein:  
MASNPQSSGAQPLRPAVVGSTGPPQNFGPPMSMQFRPVVPAQQTHQFIPAASQQFRPVGQGVPGSNIGIPSGQTQMHHFPQAAQHLPPRSGPPAPPSSQAIPMPYVQPSRPMTSGSLQPQQNPQMPNTHLPNLGGIGMPLSSSYTFATSYGQPPNTVNTPSQYQPASQMQPPITPAVGQPWSAPGTQNVPLVTPLVQAAPQSSATGAAGGTLATTNAQPRSSEQTSSDWQEHTSADGKRYYYNKKTRQSSWEKPFELMTPIERADASTDWKEFSTSDGRTYYYNKVTKISKWIIPDELKLAREQALRAAAQQAHTETGTASVAPVAPTVSSGEIPSTTTTSVIPGTTSAVASSFVPVAVNSVISSSAMASVSPSVIPSPGILSSSSLGIPSTVGSSNLQTTITPLPAPISANTVVSTVATESASSNTKSNHDSSSLLNTASVPDGASAQDLEEAKKAMPVTGKVNVTPMEEKTIDEEPLVYSNKQEAKAAFKALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIKQKKAREDFTRMLEECKELTSSTRWSKAGTMFENDERFHAVERPRDREDLFESYLVDLQKKERAKAAEEHKRNIMEYRAFLESCDFIKANTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIHDLEKEEEEQRKIQKEQLRRQERKNRDEFRKLMEEHVAAGILTAKTHWRDYCMQVKDLPSYIAVSSNTSGSTPKDLFEDVAEELEKQYHEDKAQIKEAIKIRKIALASSWTFEDFKAATLGDDSLKGISETNMKLVFDELLERLREKEEKEAKKRQRLADNFSDLLYSIKEITASSRWEDCKSLFEDSQEYRSIGDENVVREIFEEHVTRLQEKLKEKERKREEEKAKKEKEREEKEKRKEKERKEKEERKEKEREREKDKGKDRSRKDEAESENVDVMDSHGSKDRKRERDKERKHRKRHHSMADDVSSEKDDKEESKKSRRHSSDRKKSRKHAYTTDSDSENRHKRHKKDRDGSRRNGGYEELEDGELGEDGEIR